Bacterial Pathogens and Indicators, Viruses and Parasites in Various Food Commodities - April 1, 2018 to March 31, 2023

Food microbiology - Targeted surveys - Interim report

Summary

From April 1, 2018 to March 31, 2023, a total of 30,674 food samples were tested in a suite of ongoing targeted surveysFootnote 1 to investigate the presence of bacterial pathogens and indicators, viruses and parasites.

Of the samples tested, 99.4% were satisfactory, 0.5% were investigative, and 0.1% were unsatisfactory. The Canadian Food Inspection Agency (CFIA) conducted appropriate follow-up activities including the oversight of industry led voluntary food recalls. There were no reported illnesses related to these products.

Final reports, which will include a detailed analysis of the results, will be published over the next few years as the surveys are completed.

What is an interim report

An interim report provides preliminary results related to on-going targeted surveysFootnote 1 which can vary in duration from several months to several years depending on the objective of each survey.

Will final reports be published

Yes, upon conclusion of the surveys, final reports or scientific publications will be published.

What foods were tested

The presence of bacterial pathogens and indicators, viruses and parasites were investigated in a variety of foods of the following commodities:

  • raw dairy milk cheese
  • fresh and frozen fruits and vegetables
  • seafood
  • powdered infant formula and baby food
  • tahini
  • guacamole
  • fresh herb paste
  • seaweed salad
  • raw shelled nuts
  • ready-to-eat (RTE) meat sausages
  • kimchi

Why were these foods tested

The selected foods are all commonly consumed by Canadians of all agesFootnote 2. Unfortunately, most of these commodities have been associated with recalls and outbreaks of foodborne illnesses. Contamination with pathogens can occur at any step in the food supply chain such as during production, processing, packaging, distribution and/or at retail. Given that most of the commodities covered by this report are consumed without further preparation, the presence of pathogens creates the potential for foodborne illness.

When were the samples collected

The samples were collected from April 1, 2018 to March 31, 2023. This report covers a period of 5 fiscal years (2018-2019, 2019-2020, 2020-2021, 2021-2022 and 2022-2023) with a fiscal year being a 12 month period from April 1 to March 31 of the following year.

Where were the samples collected from

Samples were collected from national retail chains and local/regional grocery stores located in 11 major cities across Canada:

  • Halifax
  • Saint John or Moncton
  • Quebec City
  • Montreal
  • Toronto
  • Ottawa
  • Vancouver
  • Kelowna or Victoria
  • Calgary
  • Saskatoon
  • Winnipeg

A sample consisted of a single or multiple consumer-size packages from the same lot weighing at least 250g. The planned number of samples to be collected from each city was based on the population of the province in which the city was located relative to the total population of Canada.

What methods were used to test the samples

Samples were analyzed using analytical methods published in Health Canada's Compendium of Analytical Methods for the Microbiological Analysis of FoodsFootnote 3, CFIA internally-developed methods, methods from other organizations such as ISO or FDA BAM, and methods that detect the presence of deoxyribonucleic acid (DNA) of Cyclospora and Giardia.

How were the samples assessed

The samples were assessed using criteria (tables 1, 2, 3) based on the principles of the following Health Canada documents: Health Products and Food Branch (HPFB) Standards and Guidelines for Microbiological Safety of Food – An Interpretive SummaryFootnote 4, Policy on Listeria monocytogenes in Ready-to-Eat FoodsFootnote 5 and the Food and Drugs Act (Section 4 (1))Footnote 6. In the absence of Health Canada standards, policies or guidelines, the assessment criteria are based on guidelines developed by international food safety authorities. Detailed information about the assessment criteria used for each commodity will be provided in the final reports which will be published after the surveys have concluded.

Table 1. Assessment criteria for indicator organisms
Analysis Product(s) Satisfactory assessment Investigative assessment Unsatisfactory assessment
Generic Escherichia coli (E. coli)

Fresh fruits and vegetables

Frozen cut fruits

Guacamole

Herb paste

≤ 102 CFU/g or MPN/g > 102 and ≤ 103 CFU/g or MPN/g > 103 CFU/g or MPN/g
Generic E. coli

Seaweed salad

Raw shelled nuts

RTE meat sausages

≤ 102 MPN/g > 102 MPN/g N/A
Generic E. coli Raw dairy milk cheese ≤ 5x102 CFU or MPN/g > 5x102 and ≤ 2x103 CFU or MPN/g > 2x103 CFU or MPN/g
Table 2. Assessment criteria for pathogenic bacteria
Analysis Product(s) Satisfactory assessment Investigative assessment Unsatisfactory assessment
E. coli O157 All products tested for E. coli O157 Not detected/25 g N/A Detected/25 g
Non-O157 Shiga-toxigenic E. coli (STEC) All products tested for non-O157 STEC Not detected/25 g Detected/25 g N/A
Listeria monocytogenes (L. monocytogenes) Category 1 products Table Note a Not detected/25 g N/A Detected/25 g
L. monocytogenes Category 2A and 2B products Table Note a Not detected/25 g ≤102 CFU/g >102 CFU/g
L. monocytogenes

Microgreens

Whole mushrooms

Whole fruits

Not detected/25 g Detected/25 g (enumeration is required) N/A
Salmonella species (spp.) All products tested for Salmonella spp.(except for specified products) Not detected/25 g N/A Detected/25 g
Salmonella spp. RTE meat sausages Not detected/65 g N/A Detected/65 g
Salmonella spp. Powdered infant formula Not detected/125 g N/A Detected/125 g
Staphylococcus aureus (S. aureus) Raw dairy milk cheese ≤103 CFU/g >103 and ≤ 104 CFU/g >104 CFU/g
S. aureus RTE meat sausages ≤250 CFU/g >250 and ≤104 CFU/g >104 CFU/g
Enterobacteriaceae Powdered infant formula Not detected/10 g Detected/10 g (enumeration is required) N/A
Cronobacter spp. Powdered infant formula Not detected/125 g N/A Detected/125 g
Commercial sterility Baby foods in retort pouches Pass N/A Fail
Table 3. Assessment criteria for viruses and parasites
Analysis Product(s) Satisfactory assessment Investigative assessment Unsatisfactory assessment
Cyclospora Table Note b
Giardia Table Note b
Hepatitis A Virus (HAV) Table Note b
Norovirus Genotype (I and II) (NoV (GI and GII)) Table Note b
All products tested for parasites or viruses Not detected Detected N/A

What were the survey preliminary results

Details about each targeted survey and test results (as of March 31, 2023) can be found in table 4.

Table 4. Survey results as of March 31, 2023
Fiscal year(s) Product
(sample plan ID)
Microorganisms tested Number of samples tested Satisfactory (S) Investigative (I) Unsatisfactory (U) Comments
2020/2021
2021/2022
2022/2023
Imported raw dairy milk cheese
(SB3015)
L. monocytogenes Salmonella spp.
E. coli O157
S. aureus
Generic E. coli
1079 1079 0 0 All satisfactory
2021/2022
2022/2023
Domestic raw dairy milk cheese
(SB3098)
L. monocytogenes Salmonella spp.
E. coli O157
S. aureus
Generic E. coli
595 594 0 1 U= L. monocytogenes
2021/2022
2022/2023
Non-cow raw milk cheese
(SB3097)
L. monocytogenes Salmonella spp.
S. aureus
Generic E. coli
580 578 1 1 I= L. monocytogenes U=Generic E. coli
2019/2020
2020/2021
2021/2022
2022/2023
Fresh seed sprouts
(SB3082)
Salmonella spp.(2021-2023 only)
E. coli O157
STEC
Generic E. coli
983 979 3 1 I=STEC(2)
I=Generic E. coli (1)
U=Generic E. coli
2019/2020 Fresh microgreens (SB3083) L. monocytogenes Salmonella spp.
E. coli O157
STEC
Generic E. coli
75 73 2 0 I=L. monocytogenes
I=Generic E. coli
2021/2022
2022/2023
Fresh whole mushrooms (enoki, beech, oyster, king oyster)
(SB3114 and SB3226)
L. monocytogenes
Salmonella spp.
E. coli O157
Generic E. coli
956 936 20 0 I=L. monocytogenes (20)
2021/2022
2022/2023
Red onions
(SB3115, SB3120, SB3121, SB3122)
Salmonella spp.
E. coli O157
Generic E. coli
1466 1466 0 0 All satisfactory
2021/2022
2022/2023
Imported green onions
(SB3223)
HAV
NoV (GI, GII)
375 375 0 0 All satisfactory
2021/2022
2022/2023
Domestic green onions
(SB3224)
HAV
NoV (GI, GII)
128 128 0 0 All satisfactory
2020/2021
2021/2022
2022/2023
Domestic whole leafy vegetables
(SB3092)
Salmonella spp.(2021-2023 only)
E. coli O157
STEC
Generic E. coli
418 415 3 0 I=STEC (1)
I=Generic E. coli (2)
2021/2022
2022/2023
Domestic whole leafy vegetables
(SB3102)
Salmonella spp.
E. coli O157
Generic E. coli
385 382 3 0 I=Generic E. coli (3)
2021/2022
2022/2023
Domestic fresh whole vegetables
(SB3106)
Salmonella spp.
E. coli O157
Generic E. coli
495 495 0 0 All satisfactory
2020/2021
2021/2022
2022/2023
Imported whole leafy vegetables
(SB3093)
Salmonella spp. (2021-2023 only)
E. coli O157
STEC
Generic E. coli
478 476 2 0 I=STEC (2)
2021/2022
2022/2023
Imported whole leafy vegetables
(SB3101)
Salmonella spp.
E. coli O157
Generic E. coli
872 871 1 0 I=Generic E. coli
2021/2022
2022/2023
Imported fresh whole vegetables
(SB3105)
Salmonella spp.
E. coli O157
Generic E. coli
1087 1086 1 0 I=Generic E. coli
2019/2020
2020/2021
2021/2022
2022/2023
Imported
romaine lettuce
(SB3085)
Salmonella spp.(2021-2023 only)
E. coli O157
Generic E. coli
984 984 0 0 All satisfactory
2019/2020
2020/2021
2021/2022
2022/2023
Imported romaine lettuce hearts
(SB3086)
Salmonella spp.(2021-2023 only)
E. coli O157
Generic E. coli
1440 1439 1 0 I=Generic E. coli
2021/2022
2022/2023
Imported fresh whole leafy vegetables
(SB3221)
Cyclospora
Giardia
362 360 2 N/A I=Cyclospora (2)
2021/2022
2022/2023
Imported fresh leafy herbs
(SB3103)
Salmonella spp.
E. coli O157
Generic E. coli
784 773 6 5 I=Generic E. coli (6)
U=Generic E. coli (5)
2021/2022
2022/2023
Domestic fresh leafy herbs
(SB3104)
Salmonella spp.
E. coli O157
Generic E. coli
380 375 4 1 I=Generic E. coli (4)
U=Generic E. coli (1)
2020/2021 Domestic whole fresh vegetables and herbs
(F258R)
Salmonella spp.
E. coli O157
Generic E. coli
91 91 0 0 All satisfactory
2020/2021 Imported whole fresh vegetables and herbs
(F259R)
Salmonella spp.
E. coli O157
Generic E. coli
196 196 0 0 All satisfactory
2020/2021 Domestic fresh-cut RTE prepackaged vegetable salads
(F242R)
L. monocytogenes Salmonella spp.
E. coli O157
Generic E. coli
15 15 0 0 All satisfactory
2020/2021 Imported fresh-cut RTE prepackaged vegetable salads
(F247R)
L. monocytogenes Salmonella spp.
E. coli O157
Generic E. coli
193 193 0 0 All satisfactory
2021/2022
2022/2023
Fresh-cut RTE prepackaged leafy vegetable- based salads with dressing kids
(SB3209)
L. monocytogenes Salmonella spp.
E. coli O157
Generic E. coli
858 855 0 3 U=L. monocytogenes (2)
U=Salmonella spp. (1)
2021/2022
2022/2023
Fresh-cut RTE prepackaged leafy vegetable-based salads without dressing kits
(SB3210)
L. monocytogenes Salmonella spp.
E. coli O157
Generic E. coli
777 774 0 3 U=L. monocytogenes (3)
2021/2022
2022/2023
Imported fresh-cut leafy vegetable-based salads
(SB3217)
HAV
NoV (GI, GII)
569 569 0 N/A All satisfactory
2021/2022
2022/2023
Domestic fresh-cut leafy vegetable-based salads
(SB3218)
HAV
NoV (GI, GII)
193 193 0 N/A All satisfactory
2019/2020
2020/2021
2021/2022
2022/2023
Imported fresh-cut romaine lettuce
(SB3087)
Salmonella spp. (2021-2023 only)
E. coli O157
Generic E. coli
1080 1080 0 0 All satisfactory
2020/2021
2021/2022
2022/2023
Imported fresh-cut leafy vegetable-based salads
(F263R and SB3222)
Cyclospora
Giardia
882 878 4 N/A I=Cyclospora (2)
I=Giardia (2)
2020/2021 Domestic fresh whole fruits
(F260R)
Salmonella spp.
E. coli O157
Generic E. coli
81 81 0 0 All satisfactory
2020/2021 Imported fresh whole fruits
(F261R)
Salmonella spp.
E. coli O157
Generic E. coli
194 194 0 0 All satisfactory
2021/2022
2022/2023
Imported fresh whole fruits
(SB3107)
L. monocytogenes
Salmonella spp.
E. coli O157
Generic E. coli
790 779 11 0 I=L. monocytogenes (11)
2021/2022
2022/2023
Domestic fresh whole fruits
(SB3108)
L. monocytogenes
Salmonella spp.
E. coli O157
Generic E. coli
392 385 7 0 I=L. monocytogenes (7)
2021/2022
2022/2023
Imported fresh berries
(SB345)
HAV
NoV (GI, GII)
591 591 0 N/A All satisfactory
2021/2022
2022/2023
Domestic fresh berries
(SB346)
HAV
NoV (GI, GII)
248 248 0 N/A All satisfactory
2021/2022
2022/2023
Fresh-cut fruits
(SB3211)
L. monocytogenes
Salmonella spp.
E. coli O157
Generic E. coli
809 808 0 1 U=L. monocytogenes
2021/2022
2022/2023
Frozen berries
(SB3215 and SB3225)
HAV
NoV (GI, GII)
689 687 2 N/A I=Norovirus (2)
2021/2022
2022/2023
Frozen cut fruits
(SB3112)
L. monocytogenes
Salmonella spp.
E. coli O157
Generic E. coli
589 589 0 0 All satisfactory
2021/2022
2022/2023
Frozen cut fruits (bulk packaged)
(SB3212)
L. monocytogenes
Salmonella spp.
E. coli O157
Generic E. coli
274 274 0 0 All satisfactory
2018/2019
2019/2020
Imported frozen- cut fruits
(SB3063)
HAV
NoV (GI, GII)
484 484 0 N/A All satisfactory
2021/2022
2022/2023
Frozen- cut fruits
(SB3216, SB3088)
HAV
NoV (GI, GII)
1130 1130 0 N/A All satisfactory
2020/2021
2021/2022
2022/2023
Imported tahini
(FS358R and SB3099)
Salmonella spp. 346 343 N/A 3 U=Salmonella spp.(3)
2021/2022
2022/2023
Guacamole
(SB3113)
L. monocytogenes
Salmonella spp.
E. coli O157
Generic E. coli
592 592 0 0 All satisfactory
2021/2022
2022/2023
Herb paste
(SB3116)
L. monocytogenes
Salmonella spp.
E. coli O157
Generic E. coli
87 87 0 0 All satisfactory
2021/2022
2022/2023
Seaweed salad
(SB3117)
L. monocytogenes
Salmonella spp.
E. coli O157
Generic E. coli
572 562 10 0 I=L. monocytogenes (10)
2021/2022
2022/2023
Domestic oysters
(SB3219)
HAV
NoV (GI, GII)
276 261 15 N/A I=NoV (GI) (1)
I=Nov (GII) (10)
I=NoV (GI and GII) (4)
2021/2022
2022/2023
Imported oysters
(SB3220)
HAV
NoV (GI, GII)
87 41 46 N/A I=NoV (GI) (11)
I=NoV (GII) (10)
I=NoV (GI and GII) (25)
2021/2022
2022/2023
RTE meat sausages
(SB3213)
L. monocytogenes
Salmonella spp.
S. aureus
Generic E. coli
571 570 1 0 I=Generic E. coli
2021/2022
2022/2023
Raw shelled nuts
(SB3119)
Salmonella spp.
E. coli O157
Generic E. coli
983 983 0 0 All satisfactory
2020/2021
2021/2022
2022/2023
Powdered infant formula
(FS360R and SB3100)
Salmonella spp.(2021-2023 only)
Cronobacter spp. Enterobacteriaceae
409 408 1 0 I=Enterobacteriaceae
2021/2022
2022/2023
Baby food in retort pouches
(SB3214)
Commercial sterility 378 378 0 0 All satisfactory
2022/2023 Imported fresh leafy herbs (seasonal focus on cilantro) (SB3081) Cyclospora 353 351 2 0 I=Cyclospora
2022/2023 Fresh whole hot peppers (SB3123) Salmonella spp.
E. coli O157
Generic E. coli
298 294 2 2 I=Generic E. coli (2)
U=Generic E. coli (2)
2022/2023 Refrigerated kimchi (SB3125) L. monocytogenes Salmonella spp.
E. coli O157
297 297 0 0 All satisfactory
2022/2023 Imported fresh berries (SB341) Cyclospora 376 375 1 0 I=Cyclospora
Total (%) - - 30,672 30,500 (99.4) 151 (0.5) 21
(0.07)
-

What is done with the survey results

All results are used to:

  • inform risk management decisions
  • support program design and re-design

All investigative and unsatisfactory results triggered appropriate follow-up actions such as:

  • on site visit of the manufacturer
  • follow-up with the importer
  • review of hygiene and sanitation procedures
  • review of production and distribution records
  • review of previous laboratory test results
  • additional sampling and testing
  • food recalls

Can I access the survey data

All of the results reported herein are considered preliminary, as the targeted surveys are still ongoing. Therefore, the data will only be accessible to the public on the Open Government portal following the publication of the final report or scientific publication.